Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917041.1_cds_XP_016466682.1_59512
CDS Infomation

[gene=LOC107789400] [db_xref=GeneID:107789400] [protein=MACPF domain-containing protein NSL1-like] [protein_id=XP_016466682.1] [location=complement(join(14855..15544,15796..15962,17035..17218,17337..17420,18420..18624,19398..19636,21010..21282))] [gbkey=CDS]
Sequence

ATGGCGTTTAATCCTGGTAGTAGAATGGACCCACAAGCGGCAGCAGAAAAAGCCGTCTCA
GTGATCGGGTTCGGTTATGATTTGACGAGTGATATCCGGTTGACGGCGTGTAAACCCGGT
CCAAGCGGGTCGGGTTTGATAGAGGTTGATCAGAAGTCGACCAAGGACCTAGTGGTGCCA
GGTGGGGTGGTGGTTTCAAAGGTTTCGACTTCAATCAAGTGCGATAAAGGTGAACGAACT
AGGTTTCGCTCTGATGCTCTCTCTTTTAGTCAGATGTCAGAACAATTGAATCAGGAGTTA
TCTTTGTCTGGTAAGATACCTTCTGGTTTGTTTAATGCAATGTTTGGTCATAAGGGATGC
TGGCAAAAGGATGCAGCTTCGACAAAGCTTCTTGCCTTTGATGGTTGGTTTATTACCTTG
TACAATATTGAGTTAGTGAGATCCCATCTAACACTATCTGAGCAAGTGAAGCAAGATGTG
CCTTCTTCGTGGGATCCTTCTGCGCTTGCAGAGTTCATCGAAAAATATGGCACCCATATT
GTTGTCGGGGTAAAGATGGGAGGCAAGGATGTAATTCACATAAAGCAGCTGCAGAATTCA
ACTCTTCAGCCAATGGAGGTGCAGAAATTACTTAAGCAATTAGCTGATGAGAAATTTTCA
GAAGACGTAAATGGATGCCAGATGCGAAACTCTGTTAAATCTTCTGAAAAACCAAAGGAT
GAAAAATCCATATTCTCAGATCCTCATCTACCATTTGCAAACTCAATAAGACCATCTATT
ATGTCTCACTCGAAAGCTGATGATCTACTAAGCATTCATATCCGTCGCGGAGGTCTTGAT
TTTGGTCAAAGGCATAGCCAGTGGCTTCCTACTGTATCACAGTCCCCCAATGTCATATCA
ATGTCTTTTGTGCCTATTGCTTCACTTTTGAGTGGTGTAAGGGGCAGTGGATTTCTAAGC
CATGCAATTAATCTTTACCTGCGATATAAACCGCCAATCGAGGAACTTGAACAATTTTTA
GAATTTCAGTTACCTCGGCAGTGGGCTCCAGCATATAGTGATCTTCCTCTTGGTCATCGT
CACAGGAAACAATCCTCTCCATCTTTGCAGTTTACTTTGTTGGGTCCAAGGCTATACGTT
AACACTATAAAGGTAGACTCTGGAAACAGGCCGGTAACTGGAATTCGGTTATACTTGGAA
GGTAAAAGGAGTGATCACCTGGCTATCCATCTTCAACATTTATCAGCACTTCCTCAAAGT
ATCCAACTAACAGATGATCTTAGCTATGAGCCTGTCGATGAGCCAGTTGAACGGGGATAT
TTTGAACCGGTCAAGTGGAGCATATTTTCACACATTTGCACTGCTCCCGTTGAATACCGT
GGAACACGAATAGATGACTCTGCTTCTATTGTGACCAAGGCCTGGTTTGAGGTGAAGGTT
ATTGGAATGAAAAAGGTCCTCTTCCTGAGGTTGGGATTCTCGATGGTCGCCTCAGCAAAG
ATCCGTCGGTCAGAGTGGGAGGGGCCCGCAAGCACATGTCGAAAATCAGGATTGATGTCA
ATGCTGATCAGCACCCCTTTCAGTACGAAACTAAATCAACCACAGAAGCCAGCTAAGGTG
GACCTGAACTCCGCAGTTTATCCTGGCGGTCCACCTTCACCGGCAAGGGCGCCAAAGATG
TCGCACTTTGTCGATACAACAGAAATGGTAAGAGGACCTGAGGAGTCACCTGGCTACTGG
GTGGTAACTGGTGCAAAGCTATGTGTAGAAGATAGTAGGATAAGAATGAAAGTGAAGTAC
TCGCTCTTAACCATACTGACAGAAGACTCATTGTTGATATAA

Peptide Sequence

PEP ID

XP_016466682.1
PEP Infomation

PREDICTED: MACPF domain-containing protein NSL1-like [Nicotiana tabacum]
Sequence

MAFNPGSRMDPQAAAEKAVSVIGFGYDLTSDIRLTACKPGPSGSGLIEVDQKSTKDLVVP
GGVVVSKVSTSIKCDKGERTRFRSDALSFSQMSEQLNQELSLSGKIPSGLFNAMFGHKGC
WQKDAASTKLLAFDGWFITLYNIELVRSHLTLSEQVKQDVPSSWDPSALAEFIEKYGTHI
VVGVKMGGKDVIHIKQLQNSTLQPMEVQKLLKQLADEKFSEDVNGCQMRNSVKSSEKPKD
EKSIFSDPHLPFANSIRPSIMSHSKADDLLSIHIRRGGLDFGQRHSQWLPTVSQSPNVIS
MSFVPIASLLSGVRGSGFLSHAINLYLRYKPPIEELEQFLEFQLPRQWAPAYSDLPLGHR
HRKQSSPSLQFTLLGPRLYVNTIKVDSGNRPVTGIRLYLEGKRSDHLAIHLQHLSALPQS
IQLTDDLSYEPVDEPVERGYFEPVKWSIFSHICTAPVEYRGTRIDDSASIVTKAWFEVKV
IGMKKVLFLRLGFSMVASAKIRRSEWEGPASTCRKSGLMSMLISTPFSTKLNQPQKPAKV
DLNSAVYPGGPPSPARAPKMSHFVDTTEMVRGPEESPGYWVVTGAKLCVEDSRIRMKVKY
SLLTILTEDSLLI

Transcript Sequence

Gene sequence data has not been registered.